The newly discovered version of the original pilot, "Where No Man Has Gone Before," includes an alternative monologue by William Shatner, as well as different theme music and closing credits.

Disc One:                      
•       Spock’s Brain
•       The Enterprise Incident
•       The Paradise Syndrome
•       And the Children Shall Lead
•       Is There In Truth No Beauty?
•       Special Features:
•       Preview trailers for each episode
•       BD Live enabled, Mobile-Blu™ enabled
Disc Two:      
•       Spectre of the Gun
•       Day of the Dove
•       For the World is Hollow and I Have Touched the Sky
•       The Tholian Web
•       Plato’s Stepchildren
•       Special Features:
•       Preview trailers for each episode
•       BD Live enabled, Mobile-Blu™ enabled
Disc Three:                    
•       Wink of an Eye
•       The Empath
•       Elaan of Troyius
•       Whom Gods Destroy
•       Let That Be Your Last Battlefield
•       Special Features:
•       Preview trailers for each episode
•       BD Live enabled, Mobile-Blu™ enabled
Disc Four:     
•       The Mark of Gideon
•       That Which Survives
•       The Lights of Zetar
•       Requiem for Methuselah
•       The Way to Eden
•       Special Features:
•       Preview trailers for each episode
•       BD Live enabled, Mobile-Blu™ enabled
Disc Five:     
•       The Cloud Minders
•       The Savage Curtain
•       All Our Yesterdays
•       Turnabout Intruder
•       Special Features:
•       Preview trailers for each episode
•       Life Beyond Trek: Walter Koenig
•       Chief Engineer’s Log
•       Memoir From Mr. Sulu
•       Captain’s Log: Bob Justman
•       BD Live enabled, Mobile-Blu™ enabled
Disc Six:      
•       The Cage
•       The Cage (Extended Version)
•       Special Features:
•       Where No Man Has Gone Before (The Unaired Alternate Version of the Pilot)
•       David Gerrold Hosts "2009 Convention Coverage"
•       "The Anthropology of Star Trek" Comic-Con Panel 2009
•       "The World of Rod Roddenberry" Comic-Con 2009
•       Billy Blackburn’s Treasure Chest: Rare Home Movies and Special Memories
Part 3
•       "To Boldly Go…" Season Three
•       Collectible Trek
•       Star Trek’s Impact